GameShell OS image files (v0.5)

As in windows, linux has file permissions.
You can find a nice starting point on linux systems here UNIX Tutorial for Beginners

So lets start from the basics.

You can check if the patch script has executable permission with (More info here http://www.ee.surrey.ac.uk/Teaching/Unix/unix5.html)

ls -l

Probably as you downloaded it from the internet, the patch doesn´t have execution rights for security reasons.

You would have to do

chmod +x patch_for_clockworkos_v0.4.sh

and then to run any script you just need to put ./ in front

./patch_for_clockworkos_v0.4.sh

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